Detailed and organized README documents are crucial for reproducing analysis. We will be working through several example repositories, then discussing which README elements, details, and layouts are most helpful when trying to reproduce an analysis. Below are several examples, but feel free to bring your own!
- https://github.com/cooplab/tempautocov
- https://github.com/RILAB/BGS_sims
- https://github.com/RILAB/AJB_MutationalTargetSize_GenomeSize
- https://github.com/LohmuellerLab/dominance
- https://github.com/lilei1/9k_BOPA_SNP/tree/master/BOPA_9k_vcf_Morex_refv1
- https://github.com/ChaochihL/Barley_Outgroups
- https://github.com/MorrellLAB/Barley_NAM_Parents